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Transfer Learning-Based Approach for Thickness Estimation on Optical Coherence Tomography of Varicose Veins

Viqar, Maryam; Madjarova, Violeta; Stoykova, Elena; Nikolov, Dimitar; Khan, Ekram; Hong, Keehoon (2024-07)

 
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micromachines-15-00902-v3.pdf (1.956Mt)
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Viqar, Maryam
Madjarova, Violeta
Stoykova, Elena
Nikolov, Dimitar
Khan, Ekram
Hong, Keehoon
07 / 2024

Micromachines
902
doi:10.3390/mi15070902
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Julkaisun pysyvä osoite on
https://urn.fi/URN:NBN:fi:tuni-202409178756

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Peer reviewed
Tiivistelmä
In-depth mechanical characterization of veins is required for promising innovations of venous substitutes and for better understanding of venous diseases. Two important physical parameters of veins are shape and thickness, which are quite challenging in soft tissues. Here, we propose the method TREE (TransfeR learning-based approach for thicknEss Estimation) to predict both the segmentation map and thickness value of the veins. This model incorporates one encoder and two decoders which are trained in a special manner to facilitate transfer learning. First, an encoder–decoder pair is trained to predict segmentation maps, then this pre-trained encoder with frozen weights is paired with a second decoder that is specifically trained to predict thickness maps. This leverages the global information gained from the segmentation model to facilitate the precise learning of the thickness model. Additionally, to improve the performance we introduce a sensitive pattern detector (SPD) module which further guides the network by extracting semantic details. The swept-source optical coherence tomography (SS-OCT) is the imaging modality for saphenous varicose vein extracted from the diseased patients. To demonstrate the performance of the model, we calculated the segmentation accuracy—0.993, mean square error in thickness (pixels) estimation—2.409 and both these metrics stand out when compared with the state-of-art methods.
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Kalevantie 5
PL 617
33014 Tampereen yliopisto
oa[@]tuni.fi | Tietosuoja | Saavutettavuusseloste