"Neeli-Venkata, Ramakanth" - Selaus tekijän mukaan TUNICRIS-julkaisut
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Chromosome and plasmid-borne PLacO3O1 promoters differ in sensitivity to critically low temperatures
Oliveira, Samuel M.D.; Goncalves, Nadia S.M.; Kandavalli, Vinodh K.; Neeli-Venkata, Ramakanth; Reyelt, Jan; Fonseca, Jose M; Lloyd-Price, Jason; Kranz, Harald; Martins, Leonardo; Ribeiro, Andre S (2019)
article<p>Temperature shifts trigger genome-wide changes in Escherichia coli's gene expression. We studied if chromosome integration impacts on a gene's sensitivity to these shifts, by comparing the single-RNA ... -
The precision of the symmetry in Z-ring placement in Escherichia coli is hampered at critical temperatures
Neeli-Venkata, Ramakanth; Oliveira, Samuel M.D.; Martins, Leonardo; Startceva, Sofia; Bahrudeen, Mohamed; Fonseca, Jose M.; Minoia, Marco; Ribeiro, Andre S. (18.05.2018)
article<p>Cell division in Escherichia coli is morphologically symmetric due to, among other things, the ability of these cells to place the Z-ring at midcell. Studies have reported that, at sub-optimal temperatures, this ... -
The Role of Nucleoid Exclusion in the Intracellular Spatial Organization of <i>Escherichia coli </i>
Neeli-Venkata, Ramakanth
Tampere University of Technology. Publication (10.11.2017)
docNot long ago, bacterial cells were regarded as organisms with hardly any internal organization, due to lack of visible physical compartments and, thus, proteins were believed to be distributed randomly. Since then, advances ... -
A strategy for dissecting the kinetics of transcription repression mechanisms
Palma, Cristina S.D.; Startceva, Sofia; Neeli-Venkata, Ramakanth; Zare, Marzieh; Goncalves, Nadia S.M.; Fonseca, Jose M.; Oliveira, Samuel M.D.; Ribeiro, Andre S.
IFMBE Proceedings (2017)
conference<p>Promoters in Escherichia coli include an ‘OFF’ state, during which transcription is halted. Here, we propose a novel empirical method for assessing the time-length spent by promoters in this state. It relies on ... -
Transcription closed and open complex formation coordinate expression of genes with a shared promoter region
Häkkinen, Antti; Oliveira, Samuel M.D.; Neeli-Venkata, Ramakanth; Ribeiro, Andre S. (01.12.2019)
article<p>Many genes are spaced closely, allowing coordination without explicit control through shared regulatory elements and molecular interactions. We study the dynamics of a stochastic model of a gene-pair in a head-to-head ...